AllenVisualCodingOphys2016

class torch_brain.datasets.AllenVisualCodingOphys2016(root=None, recording_ids=None, transform=None, split_type='poyo_plus', dirname='allen_visual_coding_ophys_2016', **kwargs)

Bases: torch_brain.datasets.mixins.CalciumImagingDatasetMixin, torch_brain.datasets.dataset.Dataset

Two-photon calcium imaging of mouse visual cortex from the Allen Brain Observatory Visual Coding dataset, recorded during presentation of visual stimuli.

Preprocessing

To download and prepare this dataset, run

brainsets prepare allen_visual_coding_ophys_2016

get_sampling_intervals(split=None)

Returns a dictionary of sampling intervals for each recording. This represents the intervals that can be sampled from each session.

This dictionary will be used by torch_brain’s Samplers to know where to sample from.

The default method returns intervals containing the entire domain of each recording. This behavior can be overridden by subclasses to give out custom sampling intervals.

Returns:

Dictionary mapping recording IDs to their time domain intervals.